Top 5 Mistakes CIS Contractors Make and How to Avoid Them

Discover the top 5 mistakes CIS contractors make, from registration errors to incorrect deductions. Learn how to stay compliant with HMRC rules

Introduction

The Construction Industry Scheme (CIS) is a vital framework established by HM Revenue & Customs (HMRC) to regulate tax deductions within the UK construction sector. Under CIS, contractors deduct money from payments made to subcontractors and pass these deductions directly to HMRC as advance payments towards the subcontractor’s tax and National Insurance liabilities. This system applies to a wide range of construction-related activities, including site preparation, building work, repairs, demolition, and installing systems such as heating and lighting.

For contractors and subcontractors alike, compliance with CIS is essential to avoid costly penalties, cash flow disruptions, and operational challenges. Despite its importance, many contractors inadvertently make common mistakes in registration, verification, deductions, and reporting. These errors can lead to higher deduction rates, fines, and administrative burdens that impact business profitability and reputation.

This article highlights the top five mistakes CIS contractors frequently make and provides practical advice on how to avoid them, ensuring your business remains compliant and efficient.

1. Failure to Register or Incorrect Registration with HMRC

One of the most critical mistakes that contractors make is failing to register for CIS on time. They will usually hold a UTR (Unique Taxpayer Reference) number made up of 10 digits. However, they must contact HMRC to change their status, in order for the intermediary or contracting company to deduct 20% tax, instead of 30%

All businesses carrying out construction operations in the UK-whether companies or self-employed individuals, must register with HMRC when working on a building or civils project.

Common registration mistakes include:

  • Registering late or after work has commenced
  • Providing incorrect UTR numbers, National Insurance numbers, or business structure details
  • Failing to update HMRC with changes in business information

The consequences of these errors can be severe. Late registration often results in a higher deduction rate of 30% on payments to subcontractors, increasing costs for both parties. Whilst the subcontract worker can claim the tax back, they are inconvenienced, having to wait until the end of the tax year to claim overpayments back. Additionally, penalties may be imposed, and administrative burdens increase as corrections and communications with HMRC become necessary.

How to Avoid This Mistake:


Register promptly with HMRC before beginning any construction work. Ensure all registration information is accurate and up to date. If you are uncertain about the process or your obligations, seek professional advice to ensure compliance from the outset.

2. Not Verifying Subcontractors Before Payments

Verifying subcontractors with HM Revenue & Customs (HMRC) before making any payments is a legal obligation for contractors under the Construction Industry Scheme (CIS). This verification process confirms whether the subcontractor is registered under CIS and determines the correct deduction rate to apply-either 0% (gross payment), 20%, or 30% (if unregistered).

Failing to verify subcontractors or doing so late can lead to serious consequences, including applying incorrect deduction rates, underpaying tax to HMRC, and incurring penalties. Moreover, it risks disputes with subcontractors and damages trust within the supply chain.

Best Practices:

  • Verify all subcontractors before their first payment using HMRC’s online CIS service or approved commercial software.
  • Keep a record of each subcontractor’s CIS verification number, which begins with a ‘V’ followed by 10 digits. This number acts as proof of verification and confirms the appropriate deduction rate.
  • Regularly re-verify subcontractors if you have not included them on a CIS return in the current or previous two tax years.
  • Utilise automated verification tools where possible to streamline the process and reduce errors.

3. Incorrect CIS Deductions and Tax Calculations

A common mistake among contractors is applying CIS deductions incorrectly. This often occurs when deductions are made on the total invoice amount, including materials, rather than solely on the labour portion. Accepting vague or incomplete invoices without a clear breakdown of labour and materials can lead to miscalculations.

Incorrect deductions can result in overpaying or underpaying tax, which may strain relationships with subcontractors and attract penalties from HMRC.

How to Avoid This:

  • Ensure all subcontractor invoices clearly separate labour costs from materials.
  • Keep evidence of material costs to support the deduction calculations.
  • Use CIS-compliant accounting software or seek expert advice to accurately calculate deductions and maintain compliance.

4. Late or Inaccurate CIS Returns and Payment Submissions

Submitting CIS returns and payments late or with inaccuracies is a frequent error that can have costly repercussions. Contractors must submit monthly returns to HMRC detailing payments and deductions made to subcontractors. Missing deadlines, submitting incomplete or incorrect returns, or failing to submit nil returns when no payments are made can lead to escalating penalties.

Recommendations:

  • Set reminders and use calendar alerts to ensure monthly return deadlines are met.
  • Carefully review returns before submission to verify accuracy and completeness.
  • Submit nil returns if no payments were made during the period to maintain compliance.
  • Consider using software solutions that automate filing and reduce the risk of human error.

5. Poor Record Keeping and Failure to Issue Payment Statements

Maintaining accurate CIS records and issuing monthly deduction statements to subcontractors are legal requirements. Poor record keeping can hinder your ability to support deductions during HMRC audits, risk loss of gross payment status, and damage subcontractor relationships.

Failure to issue timely payment statements also breaches CIS regulations and can result in fines.

Tips for Compliance:

  • Maintain digital records of all CIS transactions, including payments, deductions, and verification details.
  • Regularly back up your data to prevent loss or corruption.
  • Issue monthly deduction statements promptly to subcontractors, clearly detailing payments and deductions.
  • Keep CIS records separate from other business accounts for clarity and ease of audit.

Conclusion

Compliance with the Construction Industry Scheme (CIS) is critical for contractors operating within the UK construction sector. Avoiding common pitfalls such as late or incorrect registration, failure to verify subcontractors, inaccurate deductions, late returns, and poor record keeping is essential to prevent costly penalties, cash flow disruptions, and reputational damage.

Proactive registration and verification, accurate calculation and deduction of tax, timely submission of monthly returns, and diligent maintenance of records form the foundation of effective CIS compliance. By adopting these best practices and seeking professional support where needed, contractors can safeguard their businesses, foster strong subcontractor relationships, and maintain smooth operations.

How Futurelink Group Can Help

At Futurelink Group, we specialise in supporting contractors to navigate the complexities of CIS compliance with confidence and ease. With nearly 30 years of experience in payroll, accountancy, and contractor services, we provide comprehensive solutions tailored to your business needs.

  • CIS Registration and Verification: We assist with prompt and accurate registration and verification of subcontractors, ensuring you apply the correct deduction rates.
  • Accurate Payroll Processing: Our expert payroll services handle CIS deductions correctly and efficiently, reducing administrative burden and risk.
  • Timely HMRC Submissions: We manage monthly CIS returns and payments to HMRC, helping you meet deadlines and avoid penalties.
  • Record Keeping and Reporting: We maintain detailed, compliant records and provide clear payment statements to subcontractors, supporting transparency and audit readiness.
  • Expert Advice and Support: Our knowledgeable team offers ongoing guidance to keep you informed of legislative changes and best practices.

Take the Next Step with Futurelink Group
Ensure your CIS compliance is robust and hassle-free. Contact Futurelink Group today to discuss how we can help you minimise risk, optimise tax processes, and focus on growing your construction business with confidence.

Discover more and get in touch with Futurelink Group.

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Craig Moss

Craig Moss is a seasoned professional in the employment and recruitment industries, based in Kings Langley, UK. With over 30 years of experience, including a successful tenure as a central London realtor handling properties up to £3 million, he now leads an exciting management role at Futurelink Group. Specialising in compliant payroll solutions for contract recruitment, Craig helps clients increase margins by up to 30% while navigating complex legislation. His people-focused approach, honed through decades in sales and people management, ensures both recruiters and workers benefit from tax-efficient, compliant solutions. Passionate about building strong relationships, Craig thrives on delivering results that drive business success.

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